numba ahead of time compilation of recursive function
I am trying to compile a recursive function ahead of time. As a MCVE, let's take the following function:
#import numba as nb
from numba.pycc import CC
cc = CC('precompiled')
#@nb.njit
@cc.export('gsum', 'int64(int64)')
def gsum(n):
if n>1:
return n+gsum(n-1)
else:
return 1
if __name__== '__main__':
## print(gsum(5))
cc.compile()
If I run this code, I get the following error trace:
Traceback (most recent call last):
File "numba_ahead.py", line 17, in <module>
cc.compile()
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler_lock.py", line 32, in _acquire_compile_lock
return func(*args, **kwargs)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/pycc/cc.py", line 212, in compile
objects, dll_exports = self._compile_object_files(build_dir)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler_lock.py", line 32, in _acquire_compile_lock
return func(*args, **kwargs)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/pycc/cc.py", line 200, in _compile_object_files
compiler.write_native_object(temp_obj, wrap=True)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/pycc/compiler.py", line 198, in write_native_object
library = self._cull_exports()
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler_lock.py", line 32, in _acquire_compile_lock
return func(*args, **kwargs)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/pycc/compiler.py", line 157, in _cull_exports
locals={}, library=library)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 904, in compile_extra
return pipeline.compile_extra(func)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 367, in compile_extra
return self._compile_bytecode()
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 835, in _compile_bytecode
return self._compile_core()
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 822, in _compile_core
res = pm.run(self.status)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler_lock.py", line 32, in _acquire_compile_lock
return func(*args, **kwargs)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 253, in run
raise patched_exception
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 244, in run
stage()
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 477, in stage_nopython_frontend
self.locals)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 1005, in type_inference_stage
infer.build_constraint()
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 816, in build_constraint
self.constrain_statement(inst)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 1016, in constrain_statement
self.typeof_assign(inst)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 1079, in typeof_assign
self.typeof_global(inst, inst.target, value)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 1177, in typeof_global
typ = self.resolve_value_type(inst, gvar.value)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 1100, in resolve_value_type
raise TypingError(msg, loc=inst.loc)
numba.errors.TypingError: Failed in nopython mode pipeline (step: nopython frontend)
Untyped global name 'gsum': cannot determine Numba type of <class 'function'>
File "numba_ahead.py", line 9:
def gsum(n):
<source elided>
if n>1:
return n+gsum(n-1)
^
So apparently cc.export
doesn't know the type of the function it is compiling, if that function calls itself. Is there any way to fix the problem? When I compile the same code just in time with njit
(commented-out lines) the code compiles just fine.
python recursion numba
add a comment |
I am trying to compile a recursive function ahead of time. As a MCVE, let's take the following function:
#import numba as nb
from numba.pycc import CC
cc = CC('precompiled')
#@nb.njit
@cc.export('gsum', 'int64(int64)')
def gsum(n):
if n>1:
return n+gsum(n-1)
else:
return 1
if __name__== '__main__':
## print(gsum(5))
cc.compile()
If I run this code, I get the following error trace:
Traceback (most recent call last):
File "numba_ahead.py", line 17, in <module>
cc.compile()
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler_lock.py", line 32, in _acquire_compile_lock
return func(*args, **kwargs)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/pycc/cc.py", line 212, in compile
objects, dll_exports = self._compile_object_files(build_dir)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler_lock.py", line 32, in _acquire_compile_lock
return func(*args, **kwargs)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/pycc/cc.py", line 200, in _compile_object_files
compiler.write_native_object(temp_obj, wrap=True)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/pycc/compiler.py", line 198, in write_native_object
library = self._cull_exports()
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler_lock.py", line 32, in _acquire_compile_lock
return func(*args, **kwargs)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/pycc/compiler.py", line 157, in _cull_exports
locals={}, library=library)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 904, in compile_extra
return pipeline.compile_extra(func)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 367, in compile_extra
return self._compile_bytecode()
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 835, in _compile_bytecode
return self._compile_core()
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 822, in _compile_core
res = pm.run(self.status)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler_lock.py", line 32, in _acquire_compile_lock
return func(*args, **kwargs)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 253, in run
raise patched_exception
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 244, in run
stage()
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 477, in stage_nopython_frontend
self.locals)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 1005, in type_inference_stage
infer.build_constraint()
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 816, in build_constraint
self.constrain_statement(inst)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 1016, in constrain_statement
self.typeof_assign(inst)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 1079, in typeof_assign
self.typeof_global(inst, inst.target, value)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 1177, in typeof_global
typ = self.resolve_value_type(inst, gvar.value)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 1100, in resolve_value_type
raise TypingError(msg, loc=inst.loc)
numba.errors.TypingError: Failed in nopython mode pipeline (step: nopython frontend)
Untyped global name 'gsum': cannot determine Numba type of <class 'function'>
File "numba_ahead.py", line 9:
def gsum(n):
<source elided>
if n>1:
return n+gsum(n-1)
^
So apparently cc.export
doesn't know the type of the function it is compiling, if that function calls itself. Is there any way to fix the problem? When I compile the same code just in time with njit
(commented-out lines) the code compiles just fine.
python recursion numba
add a comment |
I am trying to compile a recursive function ahead of time. As a MCVE, let's take the following function:
#import numba as nb
from numba.pycc import CC
cc = CC('precompiled')
#@nb.njit
@cc.export('gsum', 'int64(int64)')
def gsum(n):
if n>1:
return n+gsum(n-1)
else:
return 1
if __name__== '__main__':
## print(gsum(5))
cc.compile()
If I run this code, I get the following error trace:
Traceback (most recent call last):
File "numba_ahead.py", line 17, in <module>
cc.compile()
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler_lock.py", line 32, in _acquire_compile_lock
return func(*args, **kwargs)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/pycc/cc.py", line 212, in compile
objects, dll_exports = self._compile_object_files(build_dir)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler_lock.py", line 32, in _acquire_compile_lock
return func(*args, **kwargs)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/pycc/cc.py", line 200, in _compile_object_files
compiler.write_native_object(temp_obj, wrap=True)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/pycc/compiler.py", line 198, in write_native_object
library = self._cull_exports()
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler_lock.py", line 32, in _acquire_compile_lock
return func(*args, **kwargs)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/pycc/compiler.py", line 157, in _cull_exports
locals={}, library=library)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 904, in compile_extra
return pipeline.compile_extra(func)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 367, in compile_extra
return self._compile_bytecode()
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 835, in _compile_bytecode
return self._compile_core()
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 822, in _compile_core
res = pm.run(self.status)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler_lock.py", line 32, in _acquire_compile_lock
return func(*args, **kwargs)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 253, in run
raise patched_exception
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 244, in run
stage()
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 477, in stage_nopython_frontend
self.locals)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 1005, in type_inference_stage
infer.build_constraint()
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 816, in build_constraint
self.constrain_statement(inst)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 1016, in constrain_statement
self.typeof_assign(inst)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 1079, in typeof_assign
self.typeof_global(inst, inst.target, value)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 1177, in typeof_global
typ = self.resolve_value_type(inst, gvar.value)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 1100, in resolve_value_type
raise TypingError(msg, loc=inst.loc)
numba.errors.TypingError: Failed in nopython mode pipeline (step: nopython frontend)
Untyped global name 'gsum': cannot determine Numba type of <class 'function'>
File "numba_ahead.py", line 9:
def gsum(n):
<source elided>
if n>1:
return n+gsum(n-1)
^
So apparently cc.export
doesn't know the type of the function it is compiling, if that function calls itself. Is there any way to fix the problem? When I compile the same code just in time with njit
(commented-out lines) the code compiles just fine.
python recursion numba
I am trying to compile a recursive function ahead of time. As a MCVE, let's take the following function:
#import numba as nb
from numba.pycc import CC
cc = CC('precompiled')
#@nb.njit
@cc.export('gsum', 'int64(int64)')
def gsum(n):
if n>1:
return n+gsum(n-1)
else:
return 1
if __name__== '__main__':
## print(gsum(5))
cc.compile()
If I run this code, I get the following error trace:
Traceback (most recent call last):
File "numba_ahead.py", line 17, in <module>
cc.compile()
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler_lock.py", line 32, in _acquire_compile_lock
return func(*args, **kwargs)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/pycc/cc.py", line 212, in compile
objects, dll_exports = self._compile_object_files(build_dir)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler_lock.py", line 32, in _acquire_compile_lock
return func(*args, **kwargs)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/pycc/cc.py", line 200, in _compile_object_files
compiler.write_native_object(temp_obj, wrap=True)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/pycc/compiler.py", line 198, in write_native_object
library = self._cull_exports()
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler_lock.py", line 32, in _acquire_compile_lock
return func(*args, **kwargs)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/pycc/compiler.py", line 157, in _cull_exports
locals={}, library=library)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 904, in compile_extra
return pipeline.compile_extra(func)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 367, in compile_extra
return self._compile_bytecode()
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 835, in _compile_bytecode
return self._compile_core()
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 822, in _compile_core
res = pm.run(self.status)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler_lock.py", line 32, in _acquire_compile_lock
return func(*args, **kwargs)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 253, in run
raise patched_exception
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 244, in run
stage()
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 477, in stage_nopython_frontend
self.locals)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 1005, in type_inference_stage
infer.build_constraint()
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 816, in build_constraint
self.constrain_statement(inst)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 1016, in constrain_statement
self.typeof_assign(inst)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 1079, in typeof_assign
self.typeof_global(inst, inst.target, value)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 1177, in typeof_global
typ = self.resolve_value_type(inst, gvar.value)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 1100, in resolve_value_type
raise TypingError(msg, loc=inst.loc)
numba.errors.TypingError: Failed in nopython mode pipeline (step: nopython frontend)
Untyped global name 'gsum': cannot determine Numba type of <class 'function'>
File "numba_ahead.py", line 9:
def gsum(n):
<source elided>
if n>1:
return n+gsum(n-1)
^
So apparently cc.export
doesn't know the type of the function it is compiling, if that function calls itself. Is there any way to fix the problem? When I compile the same code just in time with njit
(commented-out lines) the code compiles just fine.
python recursion numba
python recursion numba
asked Nov 23 at 7:29
Thomas Kühn
5,20621837
5,20621837
add a comment |
add a comment |
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