numba ahead of time compilation of recursive function












3














I am trying to compile a recursive function ahead of time. As a MCVE, let's take the following function:



#import numba as nb
from numba.pycc import CC
cc = CC('precompiled')

#@nb.njit
@cc.export('gsum', 'int64(int64)')
def gsum(n):
if n>1:
return n+gsum(n-1)
else:
return 1

if __name__== '__main__':
## print(gsum(5))
cc.compile()


If I run this code, I get the following error trace:



Traceback (most recent call last):
File "numba_ahead.py", line 17, in <module>
cc.compile()
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler_lock.py", line 32, in _acquire_compile_lock
return func(*args, **kwargs)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/pycc/cc.py", line 212, in compile
objects, dll_exports = self._compile_object_files(build_dir)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler_lock.py", line 32, in _acquire_compile_lock
return func(*args, **kwargs)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/pycc/cc.py", line 200, in _compile_object_files
compiler.write_native_object(temp_obj, wrap=True)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/pycc/compiler.py", line 198, in write_native_object
library = self._cull_exports()
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler_lock.py", line 32, in _acquire_compile_lock
return func(*args, **kwargs)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/pycc/compiler.py", line 157, in _cull_exports
locals={}, library=library)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 904, in compile_extra
return pipeline.compile_extra(func)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 367, in compile_extra
return self._compile_bytecode()
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 835, in _compile_bytecode
return self._compile_core()
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 822, in _compile_core
res = pm.run(self.status)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler_lock.py", line 32, in _acquire_compile_lock
return func(*args, **kwargs)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 253, in run
raise patched_exception
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 244, in run
stage()
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 477, in stage_nopython_frontend
self.locals)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 1005, in type_inference_stage
infer.build_constraint()
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 816, in build_constraint
self.constrain_statement(inst)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 1016, in constrain_statement
self.typeof_assign(inst)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 1079, in typeof_assign
self.typeof_global(inst, inst.target, value)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 1177, in typeof_global
typ = self.resolve_value_type(inst, gvar.value)
File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 1100, in resolve_value_type
raise TypingError(msg, loc=inst.loc)
numba.errors.TypingError: Failed in nopython mode pipeline (step: nopython frontend)
Untyped global name 'gsum': cannot determine Numba type of <class 'function'>

File "numba_ahead.py", line 9:
def gsum(n):
<source elided>
if n>1:
return n+gsum(n-1)
^


So apparently cc.export doesn't know the type of the function it is compiling, if that function calls itself. Is there any way to fix the problem? When I compile the same code just in time with njit (commented-out lines) the code compiles just fine.










share|improve this question



























    3














    I am trying to compile a recursive function ahead of time. As a MCVE, let's take the following function:



    #import numba as nb
    from numba.pycc import CC
    cc = CC('precompiled')

    #@nb.njit
    @cc.export('gsum', 'int64(int64)')
    def gsum(n):
    if n>1:
    return n+gsum(n-1)
    else:
    return 1

    if __name__== '__main__':
    ## print(gsum(5))
    cc.compile()


    If I run this code, I get the following error trace:



    Traceback (most recent call last):
    File "numba_ahead.py", line 17, in <module>
    cc.compile()
    File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler_lock.py", line 32, in _acquire_compile_lock
    return func(*args, **kwargs)
    File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/pycc/cc.py", line 212, in compile
    objects, dll_exports = self._compile_object_files(build_dir)
    File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler_lock.py", line 32, in _acquire_compile_lock
    return func(*args, **kwargs)
    File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/pycc/cc.py", line 200, in _compile_object_files
    compiler.write_native_object(temp_obj, wrap=True)
    File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/pycc/compiler.py", line 198, in write_native_object
    library = self._cull_exports()
    File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler_lock.py", line 32, in _acquire_compile_lock
    return func(*args, **kwargs)
    File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/pycc/compiler.py", line 157, in _cull_exports
    locals={}, library=library)
    File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 904, in compile_extra
    return pipeline.compile_extra(func)
    File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 367, in compile_extra
    return self._compile_bytecode()
    File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 835, in _compile_bytecode
    return self._compile_core()
    File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 822, in _compile_core
    res = pm.run(self.status)
    File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler_lock.py", line 32, in _acquire_compile_lock
    return func(*args, **kwargs)
    File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 253, in run
    raise patched_exception
    File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 244, in run
    stage()
    File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 477, in stage_nopython_frontend
    self.locals)
    File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 1005, in type_inference_stage
    infer.build_constraint()
    File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 816, in build_constraint
    self.constrain_statement(inst)
    File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 1016, in constrain_statement
    self.typeof_assign(inst)
    File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 1079, in typeof_assign
    self.typeof_global(inst, inst.target, value)
    File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 1177, in typeof_global
    typ = self.resolve_value_type(inst, gvar.value)
    File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 1100, in resolve_value_type
    raise TypingError(msg, loc=inst.loc)
    numba.errors.TypingError: Failed in nopython mode pipeline (step: nopython frontend)
    Untyped global name 'gsum': cannot determine Numba type of <class 'function'>

    File "numba_ahead.py", line 9:
    def gsum(n):
    <source elided>
    if n>1:
    return n+gsum(n-1)
    ^


    So apparently cc.export doesn't know the type of the function it is compiling, if that function calls itself. Is there any way to fix the problem? When I compile the same code just in time with njit (commented-out lines) the code compiles just fine.










    share|improve this question

























      3












      3








      3







      I am trying to compile a recursive function ahead of time. As a MCVE, let's take the following function:



      #import numba as nb
      from numba.pycc import CC
      cc = CC('precompiled')

      #@nb.njit
      @cc.export('gsum', 'int64(int64)')
      def gsum(n):
      if n>1:
      return n+gsum(n-1)
      else:
      return 1

      if __name__== '__main__':
      ## print(gsum(5))
      cc.compile()


      If I run this code, I get the following error trace:



      Traceback (most recent call last):
      File "numba_ahead.py", line 17, in <module>
      cc.compile()
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler_lock.py", line 32, in _acquire_compile_lock
      return func(*args, **kwargs)
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/pycc/cc.py", line 212, in compile
      objects, dll_exports = self._compile_object_files(build_dir)
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler_lock.py", line 32, in _acquire_compile_lock
      return func(*args, **kwargs)
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/pycc/cc.py", line 200, in _compile_object_files
      compiler.write_native_object(temp_obj, wrap=True)
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/pycc/compiler.py", line 198, in write_native_object
      library = self._cull_exports()
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler_lock.py", line 32, in _acquire_compile_lock
      return func(*args, **kwargs)
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/pycc/compiler.py", line 157, in _cull_exports
      locals={}, library=library)
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 904, in compile_extra
      return pipeline.compile_extra(func)
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 367, in compile_extra
      return self._compile_bytecode()
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 835, in _compile_bytecode
      return self._compile_core()
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 822, in _compile_core
      res = pm.run(self.status)
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler_lock.py", line 32, in _acquire_compile_lock
      return func(*args, **kwargs)
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 253, in run
      raise patched_exception
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 244, in run
      stage()
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 477, in stage_nopython_frontend
      self.locals)
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 1005, in type_inference_stage
      infer.build_constraint()
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 816, in build_constraint
      self.constrain_statement(inst)
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 1016, in constrain_statement
      self.typeof_assign(inst)
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 1079, in typeof_assign
      self.typeof_global(inst, inst.target, value)
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 1177, in typeof_global
      typ = self.resolve_value_type(inst, gvar.value)
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 1100, in resolve_value_type
      raise TypingError(msg, loc=inst.loc)
      numba.errors.TypingError: Failed in nopython mode pipeline (step: nopython frontend)
      Untyped global name 'gsum': cannot determine Numba type of <class 'function'>

      File "numba_ahead.py", line 9:
      def gsum(n):
      <source elided>
      if n>1:
      return n+gsum(n-1)
      ^


      So apparently cc.export doesn't know the type of the function it is compiling, if that function calls itself. Is there any way to fix the problem? When I compile the same code just in time with njit (commented-out lines) the code compiles just fine.










      share|improve this question













      I am trying to compile a recursive function ahead of time. As a MCVE, let's take the following function:



      #import numba as nb
      from numba.pycc import CC
      cc = CC('precompiled')

      #@nb.njit
      @cc.export('gsum', 'int64(int64)')
      def gsum(n):
      if n>1:
      return n+gsum(n-1)
      else:
      return 1

      if __name__== '__main__':
      ## print(gsum(5))
      cc.compile()


      If I run this code, I get the following error trace:



      Traceback (most recent call last):
      File "numba_ahead.py", line 17, in <module>
      cc.compile()
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler_lock.py", line 32, in _acquire_compile_lock
      return func(*args, **kwargs)
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/pycc/cc.py", line 212, in compile
      objects, dll_exports = self._compile_object_files(build_dir)
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler_lock.py", line 32, in _acquire_compile_lock
      return func(*args, **kwargs)
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/pycc/cc.py", line 200, in _compile_object_files
      compiler.write_native_object(temp_obj, wrap=True)
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/pycc/compiler.py", line 198, in write_native_object
      library = self._cull_exports()
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler_lock.py", line 32, in _acquire_compile_lock
      return func(*args, **kwargs)
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/pycc/compiler.py", line 157, in _cull_exports
      locals={}, library=library)
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 904, in compile_extra
      return pipeline.compile_extra(func)
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 367, in compile_extra
      return self._compile_bytecode()
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 835, in _compile_bytecode
      return self._compile_core()
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 822, in _compile_core
      res = pm.run(self.status)
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler_lock.py", line 32, in _acquire_compile_lock
      return func(*args, **kwargs)
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 253, in run
      raise patched_exception
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 244, in run
      stage()
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 477, in stage_nopython_frontend
      self.locals)
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/compiler.py", line 1005, in type_inference_stage
      infer.build_constraint()
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 816, in build_constraint
      self.constrain_statement(inst)
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 1016, in constrain_statement
      self.typeof_assign(inst)
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 1079, in typeof_assign
      self.typeof_global(inst, inst.target, value)
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 1177, in typeof_global
      typ = self.resolve_value_type(inst, gvar.value)
      File "/opt/local/Library/Frameworks/Python.framework/Versions/3.7/lib/python3.7/site-packages/numba/typeinfer.py", line 1100, in resolve_value_type
      raise TypingError(msg, loc=inst.loc)
      numba.errors.TypingError: Failed in nopython mode pipeline (step: nopython frontend)
      Untyped global name 'gsum': cannot determine Numba type of <class 'function'>

      File "numba_ahead.py", line 9:
      def gsum(n):
      <source elided>
      if n>1:
      return n+gsum(n-1)
      ^


      So apparently cc.export doesn't know the type of the function it is compiling, if that function calls itself. Is there any way to fix the problem? When I compile the same code just in time with njit (commented-out lines) the code compiles just fine.







      python recursion numba






      share|improve this question













      share|improve this question











      share|improve this question




      share|improve this question










      asked Nov 23 at 7:29









      Thomas Kühn

      5,20621837




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